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	<title>Boing Boing &#187; new study</title>
	<atom:link href="http://boingboing.net/tag/new-study/feed" rel="self" type="application/rss+xml" />
	<link>http://boingboing.net</link>
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		<title>A new system for studying the effects of climate&#160;change</title>
		<link>http://boingboing.net/2011/10/25/a-new-system-for-studying-the-effects-of-climate-change.html</link>
		<comments>http://boingboing.net/2011/10/25/a-new-system-for-studying-the-effects-of-climate-change.html#comments</comments>
		<pubDate>Tue, 25 Oct 2011 18:25:31 +0000</pubDate>
		<dc:creator>Maggie Koerth-Baker</dc:creator>
				<category><![CDATA[Post]]></category>
		<category><![CDATA[climate change]]></category>
		<category><![CDATA[new study]]></category>
		<category><![CDATA[probability]]></category>
		<category><![CDATA[research]]></category>
		<category><![CDATA[risk]]></category>
		<category><![CDATA[Science]]></category>
		<category><![CDATA[uncertainty]]></category>

		<guid isPermaLink="false">http://boingboing.net/?p=125916</guid>
		<description><![CDATA[I've talked here before about how difficult it is to attribute any individual climactic catastrophe to climate change, particularly in the short term. Patterns and trends can be said to link to a rise in global temperature, which is linked to a rise in greenhouse gas concentrations in the atmosphere. But a heatwave, or a [...]]]></description>
			<content:encoded><![CDATA[<p>I've talked here before about <a href="http://boingboing.net/2011/05/27/tornadoes-climate-ch.html" title="Tornadoes, climate change, and real scientific literacy">how difficult it is to attribute any individual climactic catastrophe to climate change</a>, particularly in the short term. Patterns and trends can be said to link to a rise in global temperature, which is linked to a rise in greenhouse gas concentrations in the atmosphere. But a heatwave, or a tornado, or a flood? How can you say which would have happened without a rising global temperature, and which wouldn't?</p>

<p>Some German researchers are trying to make that process a little easier, using a computer model and a whole lot of probability power. <a href="http://www.pnas.org/content/early/2011/10/18/1101766108.abstract">They published a paper about this method recently</a>, using their system to estimate an 80% likelihood that the 2010 Russian heatwave was the result of climate change. <a href="http://www.wired.com/wiredscience/2011/10/russian-heat-climate-change/">Wired's Brandon Keim explains how the system works</a>:</p> 

<blockquote><p>The new method, described by Rahmstorf and Potsdam geophysicist Dim Coumou in <a href="http://www.pnas.org/content/early/2011/10/18/1101766108.abstract">an Oct. 25 Proceedings of the National Academy of Sciences study</a>, relies on a computational approach called Monte Carlo modeling. Named for that city’s famous casinos, it’s a tool for investigating tricky, probabilistic processes involving both defined and random influences: Make a model, run it enough times, and trends emerge.</p>

<p>“If you roll dice only once, it doesn’t tell you anything about probabilities,” said Rahmstorf. “Roll them 100,000 times, and afterwards I can say, on average, how many times I’ll roll a six.”</p>

<p>Rahmstorf and Comou’s “dice” were a simulation made from a century of average July temperatures in Moscow. These provided a baseline temperature trend. Parameters for random variability came from the extent to which each individual July was warmer or cooler than usual.</p>

<p>After running the simulation 100,000 times, “we could see how many times we got an extreme temperature like the one in 2010,” said Rahmstorf. After that, the researchers ran a simulation that didn’t include the warming trend, then compared the results.</p>
<p>“For every five new records observed in the last few years, one would happen without climate change. An additional four happen with climate change,” said Rahmstorf. “There’s an 80 percent probability” that climate change produced the Russian heat wave.</p></blockquote>


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		<slash:comments>8</slash:comments>
		</item>
		<item>
		<title>Epigenetics: Maybe not that big of a deal, after all, says&#160;study</title>
		<link>http://boingboing.net/2011/09/22/epigenetics-maybe-not-that-big-of-a-deal-after-all-says-study.html</link>
		<comments>http://boingboing.net/2011/09/22/epigenetics-maybe-not-that-big-of-a-deal-after-all-says-study.html#comments</comments>
		<pubDate>Thu, 22 Sep 2011 14:41:20 +0000</pubDate>
		<dc:creator>Maggie Koerth-Baker</dc:creator>
				<category><![CDATA[Post]]></category>
		<category><![CDATA[new study]]></category>
		<category><![CDATA[News]]></category>
		<category><![CDATA[research smackdown]]></category>
		<category><![CDATA[Science]]></category>
		<category><![CDATA[stay tuned]]></category>

		<guid isPermaLink="false">http://boingboing.net/?p=118951</guid>
		<description><![CDATA[A new paper is arguing that epigenetic variation&#8212;basically, what happens when an environmental trigger turns genes on and off, or makes them express differently&#8212;may not survive over many generations and, thus, would not have much of an impact on evolution in general. Expect a lot of dissent. This will be an interesting debate and I'm [...]]]></description>
			<content:encoded><![CDATA[A new paper is arguing that epigenetic variation&mdash;basically, what happens when an environmental trigger turns genes on and off, or makes them express differently&mdash;may not survive over many generations and, thus, <a href="http://www.sciencedaily.com/releases/2011/09/110920132628.htm">would not have much of an impact on evolution in general</a>. Expect a lot of dissent. This will be an interesting debate and I'm looking forward to seeing how the evidence shakes out over a few more papers. ]]></content:encoded>
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		<slash:comments>7</slash:comments>
		</item>
		<item>
		<title>Playing games to fight&#160;HIV</title>
		<link>http://boingboing.net/2011/09/20/playing-games-to-fight-hiv.html</link>
		<comments>http://boingboing.net/2011/09/20/playing-games-to-fight-hiv.html#comments</comments>
		<pubDate>Tue, 20 Sep 2011 20:07:28 +0000</pubDate>
		<dc:creator>Maggie Koerth-Baker</dc:creator>
				<category><![CDATA[Post]]></category>
		<category><![CDATA[AIDS]]></category>
		<category><![CDATA[Citizen Science]]></category>
		<category><![CDATA[cool]]></category>
		<category><![CDATA[gamers]]></category>
		<category><![CDATA[Games]]></category>
		<category><![CDATA[hiv]]></category>
		<category><![CDATA[new study]]></category>
		<category><![CDATA[News]]></category>
		<category><![CDATA[Science]]></category>

		<guid isPermaLink="false">http://boingboing.net/?p=118413</guid>
		<description><![CDATA[A couple of years ago, I told you about Foldit, a computer game that harnesses the power of human putzing to help scientists unravel the mysteries of protein structure. There's a new research paper out that uses results from Foldit as a basis for a new proposed structure of a key protein in a virus [...]]]></description>
			<content:encoded><![CDATA[<p>A couple of years ago, I told you about Foldit,<a href="http://boingboing.net/2009/05/03/wasting-time-for-a-g.html"> a computer game that harnesses the power of human putzing</a> to help scientists unravel the mysteries of protein structure. <a href="http://www.nature.com/nsmb/journal/vaop/ncurrent/full/nsmb.2119.html">There's a new research paper out that uses results from Foldit </a>as a basis for a new proposed structure of a key protein in a virus that is a relative of HIV.</p>

<p>As important as proteins are, we know relatively little about how and why these complex chains of amino acids fold and twist the way they do and how that structure relates to function. Foldit takes advantage of the fact that, given the right rules, people can come up with possible, plausible protein structures far faster than a computer program can factor out all the possible permutations. And that's why Foldit players&mdash;citizen scientists of a sort&mdash;were so useful in this case. <a href="http://blogs.discovermagazine.com/notrocketscience/2011/09/18/computer-gamers-solve-problem-in-aids-research-that-puzzled-scientists-for-years/">Ed Yong at Not Exactly Rocket Science explains</a>:</p>



<blockquote><p> They discovered the structure of a protein belonging to the Mason-Pfizer monkey virus (M-PMV), a close relative of HIV that causes AIDS in monkeys.
These viruses create many of their proteins in one big block. They need to be cut apart, and the viruses use a scissor enzyme –a protease – to do that. Many scientists are trying to find drugs that disable the proteases. If they don’t work, the virus is hobbled – it’s like a mechanic that cannot remove any of her tools from their box.</p>
<p>To disable M-PMV’s protease, we need to know exactly what it looks like. Like real scissors, the proteases come in two halves that need to lock together in order to work. If we knew where the halves joined together, we could create drugs that prevent them from uniting. But until now, scientists have only been able to discern the structure of the two halves together. They have spent more than ten years trying to solve structure of a single isolated half, without any success.</p>
<p>The Foldit players had no such problems. They came up with several answers, one of which was almost close to perfect. In a few days, Khatib had refined their solution to deduce the protein’s final structure, and he has already spotted features that could make attractive targets for new drugs.</p>
<p>“This is the first instance that we are aware of in which online gamers solved a longstanding scientific problem,” writes Khatib. “These results indi­cate the potential for integrating video games into the real-world scientific process: the ingenuity of game players is a formidable force that, if properly directed, can be used to solve a wide range of scientific problems.”</p></blockquote>

]]></content:encoded>
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		<slash:comments>11</slash:comments>
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		<title>IUDs may offer cancer&#160;protection</title>
		<link>http://boingboing.net/2011/09/15/iuds-may-offer-cancer-protection.html</link>
		<comments>http://boingboing.net/2011/09/15/iuds-may-offer-cancer-protection.html#comments</comments>
		<pubDate>Thu, 15 Sep 2011 18:53:37 +0000</pubDate>
		<dc:creator>Maggie Koerth-Baker</dc:creator>
				<category><![CDATA[Post]]></category>
		<category><![CDATA[birth control]]></category>
		<category><![CDATA[cancer]]></category>
		<category><![CDATA[health]]></category>
		<category><![CDATA[lady bits]]></category>
		<category><![CDATA[new study]]></category>
		<category><![CDATA[News]]></category>
		<category><![CDATA[Science]]></category>

		<guid isPermaLink="false">http://boingboing.net/?p=117745</guid>
		<description><![CDATA[Really interesting new study of 20,000 women suggests that the use of IUDs might reduce the risk of both major types of cervical cancer, even in women who contracted cancer-causing HPV. The researchers speculate that the IUD's presence&#8212;it is, after all, a foreign object in your lady bits&#8212;may serve to stimulate immune responses that fight [...]]]></description>
			<content:encoded><![CDATA[Really interesting new study of 20,000 women suggests that the use of <a href="http://www.canada.com/health/IUDs+almost+halve+risk+cervical+cancer+Study/5396020/story.html">IUDs might reduce the risk of both major types of cervical cancer</a>, even in women who contracted cancer-causing HPV. The researchers speculate that the IUD's presence&mdash;it is, after all, a foreign object in your lady bits&mdash;may serve to stimulate immune responses that fight off HPV infection early and prevent it from progressing to cancer. This needs follow up. But it's intriguing. <em>(Via <a href="https://twitter.com/#!/deadendrite">Colleen McCaffery</a>)</em>]]></content:encoded>
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		<slash:comments>8</slash:comments>
		</item>
		<item>
		<title>What Fukushima can teach us about coal&#160;pollution</title>
		<link>http://boingboing.net/2011/08/18/what-fukushima-can-teach-us-about-coal-pollution.html</link>
		<comments>http://boingboing.net/2011/08/18/what-fukushima-can-teach-us-about-coal-pollution.html#comments</comments>
		<pubDate>Thu, 18 Aug 2011 17:44:34 +0000</pubDate>
		<dc:creator>Maggie Koerth-Baker</dc:creator>
				<category><![CDATA[Feature]]></category>
		<category><![CDATA[climate]]></category>
		<category><![CDATA[coal]]></category>
		<category><![CDATA[Environment]]></category>
		<category><![CDATA[fukushima]]></category>
		<category><![CDATA[new study]]></category>
		<category><![CDATA[nuclear]]></category>
		<category><![CDATA[pollution]]></category>
		<category><![CDATA[research blogging]]></category>
		<category><![CDATA[Science]]></category>

		<guid isPermaLink="false">http://boingboing.net/?p=114168</guid>
		<description><![CDATA[Earlier this week, I told you about a new study tracking radioactive fallout from the nuclear power plant disaster in Fukushima, Japan. It started with a team of researchers in California, who had been monitoring radioactive sulfur in the atmosphere since 2009. Last spring, after an earthquake and tsunami critically damaged several reactors at the [...]]]></description>
			<content:encoded><![CDATA[<a href="http://boingboing.net/2011/08/18/what-fukushima-can-teach-us-about-coal-pollution.html/powerplant" rel="attachment wp-att-114197"><img src="http://boingboing.net/wp-content/uploads/2011/08/powerplant.jpeg" alt="" title="powerplant" width="640" height="411" class="aligncenter size-full wp-image-114197" /></a>

<p>Earlier this week,<a href="http://boingboing.net/2011/08/15/what-sulfur-particles-in-california-can-tell-us-about-fukushima.html" title="What sulfur particles in California can tell us about Fukushima" target="_blank"> I told you about a new study</a> tracking radioactive fallout from the nuclear power plant disaster in Fukushima, Japan.</p>

<p>It started with a team of researchers in California, who had been monitoring radioactive sulfur in the atmosphere since 2009. Last spring, after an earthquake and tsunami critically damaged several reactors at the Fukushima Daiichi power plant, those researchers watched the levels of radioactive sulfur skyrocket, relatively speaking. The amounts of radioactive sulfur that reached the California coast <a href="http://boingboing.net/2011/03/17/four-questions-about.html" title="Japan nuclear crisis: “Should I take potassium iodide pills to protect against radiation exposure?”" target="_blank">weren't high enough to be a threat to humans</a>, but they made a big impact on extremely sensitive monitoring equipment.</p>

<p>Using that data, the researchers were able to figure out where the radioactive sulfur came from and back-calculate how much would have been produced at the site of the disaster&mdash;information that can tell us something about how dangerous the disaster really was to people living nearby.</p>

<p>But these researchers weren't the first to collect radioactive isotopes from Fukushima on American shores. And they weren't the first to offer up improved estimations of how much radiation leaked from the damaged power plant in the early days of the disaster. I thought this study was interesting. But, like a lot of you, I was left wondering why it was important.</p>

<p>Then yesterday, I interviewed Antra Priyadarshi, the lead author on <a href="http://www.pnas.org/content/early/2011/08/11/1109449108.abstract" target="_blank">the peer-reviewed paper that was published about this study</a>. And I realized I'd gotten the story all wrong. This paper is about radioactive sulfur from the Fukushima disaster. But it isn't <em>about</em> the Fukushima disaster. It's not even about nuclear power. Not really.</p>

<p>In reality, this is a paper about coal. And it's important because of what it can tell us about the sort of air pollution that is much more mundane&mdash;and more deadly&mdash;than the fallout from a single nuclear disaster.</p>
<span id="more-114168"></span>

<p>To get this, you first have to understand who the researchers are and why they've been monitoring radioactive sulfur for so long. It has nothing to do with nuclear power or nuclear weapons.</p>

<p>Antra Priyadarshi is <a href="http://en.wikipedia.org/wiki/Postdoctoral_research" target="_blank">a postdoc</a>&mdash;a scientist who has recently earned their Ph.D., but is doing research under the guidance of another, older scientist. You can think of it like an apprenticeship program, in a way. Priyadarshi works in the lab of <a href="http://chem-faculty.ucsd.edu/thiemens/" target="_blank">Mark Thiemens</a>, an atmospheric scientist. The Thiemens Lab is interested in questions of climate systems and the chemical makeup of the atmosphere. In particular, they're interested in ozone.</p>

<p>Ozone is a molecule of three oxygen atoms bound together, and it's the same stuff that makes up the protective <a href="http://en.wikipedia.org/wiki/Ozone_layer" target="_blank">ozone layer</a> around there Earth. Way off in the upper atmosphere, ozone is a Good Thing. But context matters. When ozone ends up on our level, where humans can breathe it in, it becomes a problem. That's because ozone can, essentially, give the lining of your lungs a sunburn. The more ozone you inhale, the more damage to your cardiovascular system.</p>

<p>There's a couple of reasons ozone and people come into contact. One is pollution: On hot days, chemicals from car and factory exhaust can turn into ground-level ozone. But ozone from the upper atmosphere can also get transported down to our level naturally. One of the key things the Thiemens Lab is trying to understand is how those natural movements work, why they happen, and what that means for the way pollution-based ozone gets transported from exhaust-rich urban areas to other parts of the world.</p>

<p>This is where the radioactive sulfur comes in, because there's a natural source of that, as well.</p>

<p>In the upper atmosphere, where the naturally occurring ozone is formed, high-energy particles from cosmic rays react with argon to form radioactive sulfur. When air from high altitudes intrudes on our atmospheric level, it brings both ozone and radioactive sulfur along for the ride. Antra Priyadarshi has been monitoring radioactive sulfur both because of the role those isotopes play in climate&mdash;there's some evidence that they can serve as points for clouds to condense around and produce raindrops&mdash;and because of what the movement of sulfur can tell her about the movement of ozone.</p>

<p>So that explains why Priyadarshi and her colleagues were out there monitoring radioactive sulfur to begin with. But why is this paper important? What does it add to her research?</p>

<p>For that, you have to look to China, and a different form of sulfur.</p>

<large><strong><p>The Smell of Success</p></strong></large>

<p><a href="http://www.ucsusa.org/clean_energy/coalvswind/brief_coal.html" target="_blank">When we burn coal</a>, one of the things that goes up in smoke is <a href="http://en.wikipedia.org/wiki/Sulfur_dioxide" target="_blank">sulfur dioxide</a>. It's not radioactive, but it is dangerous. Sulfur dioxide, like ozone, <a href="http://www.epa.gov/oaqps001/sulfurdioxide/health.html" target="_blank">damages human respiratory and cardiovascular systems.</a> It's a key ingredient in<a href="http://en.wikipedia.org/wiki/Acid_rain" target="_blank"> acid rain</a>, which harms crops and other plants, and damages buildings. And it's also a major player in producing <a href="http://www.epa.gov/pm/health.html" target="_blank">particulate matter</a>&mdash;tiny grains that get inside your lungs and cause long-term damage.</p>

<p>Particulate matter is also an important factor in climate change. That's because, while particulates are very bad for human health, they also play a role in cooling down the planet. Basically, greenhouse gases in the atmosphere trap heat and particulate matter in the atmosphere prevents heat from the sun from getting in. These two forces work against each other, even though, in man-made terms, they come from the same place&mdash;fossil fuel emissions.</p>

<p>When we talk about cleaning up emissions, we're usually talking about reducing the amount of sulfur and particulates produced, but not the amount of greenhouse gases. So, ironically, cleaner tailpipes and smokestacks save lives in the short term, but contribute to a rising global temperature in the long term.</p>

<p>That's why people are watching China. Western countries started scrubbing sulfur out of their emissions decades ago. Our emissions aren't sulfur-free, but they're<a href="http://en.wikipedia.org/wiki/Sulfur_dioxide#As_an_air_pollutant" target="_blank"> a lot cleaner than they used to be</a>. China, on the other hand, is rapidly ramping up the amount of coal it burns, and the emissions aren't being cleaned up. It's the world's largest sulfur dioxide polluter today. And <a href="http://www.atmos-chem-phys-discuss.net/9/21257/2009/acpd-9-21257-2009.pdf" target="_blank">scientists are curious about how that sulfur dioxide in the atmosphere is masking the effects of greenhouse gases</a>. When China starts cleaning up its smokestacks, what will happen to the global temperature? How does sulfur dioxide from China affect the rest of the world?</p>

<p>That second question has been <em>very</em> difficult to answer. Think of all the coal that gets burnt everywhere, every day. In order to know something about how sulfur dioxide travels, you have to be able to separate the sulfur dioxide from one factory, or one power plant, and trace it as it moves through the atmosphere. That's like listening to five symphonies playing at once and trying to pick out the work of a single flautist.</p>

<p>Until now.</p>

<p><em>This</em> is why a study of radioactive sulfur from Fukushima matters. That disaster produced so much radioactive sulfur that it was obvious when the plume from Fukushima reached the shores of California. This signal was loud enough to stand out from the noise. The radioactive sulfur from Fukushima isn't exactly the same thing as the sulfur dioxide from Chinese power plants, but it is close enough that it can serve as a marker. It's a model that can tell scientists some important things about how sulfur travels through the atmosphere and how it crosses great distances, like the Pacific Ocean.</p>

<p>"There are lots of sources of sulfur pollution and a lot of uncertainty in the models," Antra Priyadarshi said. "But this is a case when we can know better how much radioactive sulfur was produced at the source, and how much arrived, and you can neglect the natural background signal. That gives you a better estimation of how much sulfur could be transported over the Pacific."</p>

<small><em><p>Photo by Dawn Erb. Used with permission.</p></em></small>]]></content:encoded>
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		<slash:comments>44</slash:comments>
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		<title>Hunting the wild radial&#160;tire</title>
		<link>http://boingboing.net/2011/08/03/hunting-the-wild-radial-tire.html</link>
		<comments>http://boingboing.net/2011/08/03/hunting-the-wild-radial-tire.html#comments</comments>
		<pubDate>Wed, 03 Aug 2011 16:30:44 +0000</pubDate>
		<dc:creator>Maggie Koerth-Baker</dc:creator>
				<category><![CDATA[Post]]></category>
		<category><![CDATA[anthropology]]></category>
		<category><![CDATA[new study]]></category>
		<category><![CDATA[Science]]></category>

		<guid isPermaLink="false">http://boingboing.net/?p=112052</guid>
		<description><![CDATA[One traditional way to kill a lot of bison: Run them off the edge of a cliff. Now, anthropologists are studying the landing patterns of buffalo at a Montana kill site by recreating the hunt ... with the help of some old truck tires. (Via Alex Witze)]]></description>
			<content:encoded><![CDATA[One traditional way to kill a lot of bison: Run them off the edge of a cliff. Now, anthropologists are studying the landing patterns of buffalo at a Montana kill site by recreating the hunt ... <a href="http://uanews.org/node/40925" target="_blank">with the help of some old truck tires.</a> <em>(Via <a href="https://twitter.com/#!/alexwitze" target="_blank">Alex Witze</a>)</em>]]></content:encoded>
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		<slash:comments>5</slash:comments>
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